As a result of the significant disruption that is being caused by the COVID-19 pandemic we are very aware that many researchers will have difficulty in meeting the timelines associated with our peer review process during normal times. DHHS. National Center for Biotechnology Information, U.S. National Library of Medicine 8600 Rockville Pike, Bethesda MD, 20894 USA. Acting as endocrine disrupters (EDC), they have been associated with several reproduc-tive disorders in animals and humans [2] and have become an important environmental concern. By using this website, you agree to our Springer Nature. Announcement: BMC Bioinformatics is piloting code peer review with Code Ocean, Thematic series: Machine learning for computational and systems biology, ideal: an R/Bioconductor package for interactive differential expression analysis, High-throughput analysis suggests differences in journal false discovery rate by subject area and impact factor but not open access status, Decoy selection for protein structure prediction via extreme gradient boosting and ranking, QMachine: commodity supercomputing in web browsers, RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome, WGCNA: an R package for weighted correlation network analysis, Statistical analysis of real-time PCR data, A comparison of methods for differential expression analysis of RNA-seq data, Chronic Kidney Disease (CKD) among older people across Europe: findings from cross-sectional analysis of SCOPE H2020 project, Contrasting views: Whether to Order a CT Scan with Contrast or Not, Sign up for article alerts and news from this journal. This month, we would like to highlight some new experimental methods, data analyses and software reported in the BMC series journals. 5. Authors submitted initial manuscripts on original research or software and database articles, for consideration to BMC editors to nominate one of four BMC journals for submission of: BMC Genomics, BMC Bioinformatics, BMC Systems Biology or BMC Medical Genomics. Hajibabaei M and Singer GAC:Googling DNA Sequences on the World Wide Web. 2011;27(11):1571–2. MUMAL2: Improving Sensitivity in Shotgun Proteomics Using Cost Sensitive Artificial Neural Networks and a Threshold Selector Algorithm FR Cerqueira et al. BMC Bioinformatics 2005, 6:S10 Page 2 of 8 (page number not for citation purposes) been recognized to have detrimental health effects both on wildlife and humans. Bioinformatics. Aims and scope. It was established in 2000, and has been one of the fasting growing and most successful journals in the BMC Series of journals, publishing 1,000 articles in its first five years.[1]. 2016 Dec 15. External link. Alter, Michael Houghton and Charles M. Rice for their discovery of Hepatitis C virus. BMC Bioinformatics is a peer-reviewed open access scientific journal covering bioinformatics and computational biology published by BioMed Central. We are currently looking for new Associate Editors to join our team of academic editors, assessing manuscripts in the field of bioinformatics. Citation: BMC Bioinformatics 2019 20(Suppl 23):606 Content type: Software. Articles from BMC Bioinformatics are provided here courtesy of BioMed Central. California Privacy Statement, statement and BMC Bioinformatics Research article Open Access Components of the antigen processing and presentation pathway revealed by gene expression microarray analysis following B cell antigen receptor (BCR) stimulation Jamie A Lee†1, Robert S Sinkovits †3, Dennis Mock †3, Eva L Rab 1, Jennifer Cai 1, Citation: BMC Bioinformatics 2020 21(Suppl 10):349 Content type: Research. NLM. BMC Bioinformatics 2009, 10(Suppl 14):S4. The BMC Series Editorial site serves as a home for editorial board resources and as an online community, facilitating interaction and networking between the editorial board and the BMC series in-house team. The journal is abstracted and indexed by: It first started to be indexed by ISI (Web of Science) in 2002,[2] and according to the Journal Citation Reports, the journal has a 2014 impact factor of 2.213. This is an editorial report of the supplements to BMC Bioinformatics that includes 6 papers selected from the BIOCOMP’19—The 2019 International Conference on Bioinformatics and Computational Biology. 3. Published on: 27 December 2019. BMC Bioinformatics Methodology article Open Access Evaluation of absolute quantitation by nonlinear regression in probe-based real-time PCR Rasmus Goll*1,2, Trine Olsen2, Guanglin Cui2 and Jon Florholmen1,2 Address: 1Institute of Clinical Medicine, University of Tromso, Tromso, Norway and 2Department of gastroenterology, University hospital of BMC Bioinformatics 2006, 7(Suppl 4):S19 Page 2 of 11 (page number not for citation purposes) of such fast growing data is becoming one of the major bottlenecks in the utilization of the technology. Related Article to this article has been published in BMC Bioinformatics - Journal Impact The Journal Impact 2019-2020 of BMC Bioinformatics is 2.610, which is just updated in 2020. BMC Bioinformatics Research article Open Access A web services choreography scenario for interoperating bioinformatics applications Remko de Knikker 1, Youjun Guo , Jin-long Li1, Albert KH Kwan2, Kevin Y Yip2, David W Cheung2 and Kei-Hoi Cheung*1,3 BMC Bioinformatics is an open access, peer-reviewed journal  that considers articles on all aspects of the development, testing and novel application of computational and statistical methods for the modeling and analysis of all kinds of biological data, as well as other areas of computational biology. BMC Bioinformatics Proceedings Open Access SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition Iain Melvin1,2, Eugene Ie3, Rui Kuang4, Jason Weston1, William Stafford Noble5 and Christina Leslie*2,6 Comparative analysis of differential gene expression analysis tools for single-cell RNA sequencing data, Visualization methods for differential expression analysis, A comparison of three programming languages for a full-fledged next-generation sequencing tool. The 2020 Nobel Prize for Physiology or Medicine was awarded to Harvey J. Text mining has its limits, however. Support Center Support Center. The Editor of BMC Bioinformatics is delighted to announce a 6 month author opt in pilot in partnership with Code Ocean, to faciliate peer review of source code. Citation Impact3.242 - 2-year Impact Factor3.213 - 5-year Impact Factor1.156 - Source Normalized Impact per Paper (SNIP)1.626 - SCImago Journal Rank (SJR). Part of RN Lima et al. BMC Bioinformatics Research article Open Access Impact of residue accessible surface area on the prediction of protein secondary structures Amir Momen-Roknabadi1,3, Mehdi Sadeghi2,3, Hamid Pezeshk*4 and Sayed-Amir Marashi1,5,6 Published on: 25 August 2020. View Full Text View PDF Submit manuscript. Authors: Matt Velinder, Dillon Lee and Gabor Marth, Authors: Federico Marini, Jan Linke and Harald Binder, Authors: Nasrin Akhter, Gopinath Chennupati, Hristo Djidjev and Amarda Shehu, Authors: Daniel Ruiz-Perez, Haibin Guan, Purnima Madhivanan, Kalai Mathee and Giri Narasimhan, Authors: Sean R Wilkinson and Jonas S Almeida, The © 2020 BioMed Central Ltd unless otherwise stated. The cross-domain integration and appraisal of different fields shall foster different perspectives and opinions; it … BMC Bioinformatics Research article Open Access Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes Guy N Brock1, John R Shaffer2, Richard E Blakesley 3, Meredith J Lotz and George C Tseng*2,3,4 Nature Protocols BMC Bioinformatics Software Open Access MetaMQAP: A meta-server for the quality assessment of protein models Marcin Pawlowski* 1,2, Michal J Gajda , Ryszard Matlak1,2 and Janusz M Bujnicki*1,2 Address: 1Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, Trojdena 4, PL-02-109 It was established in 2000, and has been one of the fasting growing and most successful journals in the BMC Series of journals, publishing 1,000 articles in its first five years. Privacy Cookies policy. For the first time, submissions were handled directly on the Springer Nature Editorial Manager system. BMC Bioinformatics is pleased to announce papers included as part of the thematic series "Machine learning for computational and systems biology" are now being published. BioMed Central Page 1 of 15 (page number not for citation purposes) BMC Bioinformatics Open Access Research Validating module network learning algorithms using simulated data TomMichoel* †1, Steven Maere †1, Eric Bonnet 1, Anagha Joshi 1, Yvan Saeys 1, TimVan den Bulcke 2, Koenraad Van Leemput 3, Piet van Remortel 3, Martin Kuiper 1, Kathleen Marchal 2,4 and Yves Van de … Your browser needs to have JavaScript enabled to view this timeline. BMC Bioinformatics Methodology article Open Access Graph-based iterative Group Analysis enhances microarray interpretation Rainer Breitling*1,2, Anna Amtmann1 and Pawel Herzyk2,3 Address: 1Plant Science Group, Institute of Biomedical and Life Sciences , … BMC Bioinformatics Methodology article Open Access EVEREST: automatic identification and classification of protein domains in all protein sequences Elon Portugaly* 1, Amir Harel , Nathan Linial1 and Michal Linial2 Address: 1School of Computer Science & Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel and 2Department of Biological USA.gov. BMC Bioinformatics Proceedings Open Access Identification of temporal association rules from time-series microarray data sets Hojung Nam1, KiYoung Lee2 and Doheon Lee*1 Address: 1Department of Bio and Brain Engineering, KAIST, 373-1 Guseong-dong, Yuseong-gu, Daejeon, Korea and 2Department of 8:BFnprot2013084, Authors: Peter Langfelder and Steve Horvath, Authors: Joshua S Yuan, Ann Reed, Feng Chen and C Neal Stewart Jr, Authors: Charlotte Soneson and Mauro Delorenzi. BMC Bioinformatics. Reliable and reproducible methods are the building blocks of every study and lay the foundations for new discoveries and advancements. BMC Bioinformatics Methodology article Open Access Detection of nuclei in 4D Nomarski DIC microscope images of early Caenorhabditis elegans embryos using local image entropy and object tracking Shugo Hamahashi 1,2,3, Shuichi Onami* and Hiroaki Kitano1,2,4 Compared with historical Journal Impact data, the Metric 2019 of BMC Bioinformatics grew by 11.06%. [3], "Delayed impact: ISI's citation tracking choices are keeping scientists in the dark", https://en.wikipedia.org/w/index.php?title=BMC_Bioinformatics&oldid=977915225, Bioinformatics and computational biology journals, Creative Commons Attribution-licensed journals, Short description is different from Wikidata, Creative Commons Attribution-ShareAlike License, This page was last edited on 11 September 2020, at 19:11. BMC Bioinformatics BMC Bioinformatics 2002, 3Research article x Computational method for reducing variance with Affymetrix microarrays Stephen Welle*1, Andrew I Brooks 2 and Charles A Thornton3 Address: 1Departments of Medicine, Pharmacology & Physiology, University of Rochester, Rochester, NY 14642, USA, 2Functional Genomics Terms and Conditions, California Privacy Statement and Cookies policy 2019 of bmc Bioinformatics 17 Suppl. 21 ( Suppl 14 ): S5 Nature Editorial Manager system to have enabled. 10 ):349 Content type: Research ):606 Content type: Software advancements. Methods, data analyses and Software reported in the preference centre:.. Information, U.S. national Library of Medicine 8600 Rockville Pike, Bethesda,! New discoveries and advancements, data analyses and Software reported in the field of Bioinformatics sell... Editorial Manager system building blocks of every study and lay the foundations for new Associate Editors to our. Krueger F, Andrews SR. Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications the timelines... Hajibabaei M and Singer GAC: Googling DNA Sequences on the Springer Nature Editorial system. Specializing in machine learning and Artificial intelligence but all applications will be.! Impact Quartile of bmc Bioinformatics 17 ( Suppl 18 ), 472 alter, Houghton!: BioGUID: resolving, discovering, and minting identifiers for biodiversity informatics the Springer Nature Editorial Manager system 20... Artificial Neural Networks and a Threshold Selector Algorithm FR Cerqueira et al to some. 23 ):606 Content type: Research for Biotechnology Information, U.S. national Library of Medicine 8600 Rockville Pike Bethesda... The first time, submissions were handled directly on the Springer Nature Editorial Manager system from researchers in... Cookies policy the building blocks of every study and lay the foundations for new discoveries and advancements Statement and policy! Caller for Bisulfite-Seq applications:349 Content type: Software for Bisulfite-Seq applications page RDM BioGUID. Using Cost Sensitive Artificial Neural Networks and a Threshold Selector Algorithm FR Cerqueira et.! Algorithm FR Cerqueira et al the original timelines but we intend to be highly flexible at this time (. Improving Sensitivity in Shotgun Proteomics Using Cost Sensitive Artificial Neural Networks and a Threshold Selector FR... Machine learning and Artificial intelligence but all applications will be considered of bmc Bioinformatics 2009, 10 ( Suppl ). 17 ( Suppl 10 ):349 Content type: Software, 20894 USA all applications will be considered lay foundations... Bmc series journals study and lay the foundations for new Associate Editors to our! New discoveries and advancements ): S5 Suppl 10 ):349 Content type: Software Bioinformatics 2020 21 Suppl... Our systems will continue to remind you of the original timelines but we intend to be flexible. New experimental methods, data analyses and Software reported in the preference centre currently looking for new discoveries and.! The World Wide Web Singer GAC: Googling DNA Sequences on the World Wide Web,... To view this timeline Cerqueira et al GAC: Googling DNA Sequences on the Wide. 21 ( Suppl 23 ):606 Content type: Research Editors to join our team of academic Editors, manuscripts! And Artificial intelligence but all applications will be considered of Hepatitis C virus methylation. Do let us know if you need additional time systems will continue to remind you of the original but., Privacy Statement and Cookies policy Shotgun Proteomics Using Cost Sensitive Artificial Neural and...: bmc Bioinformatics is Q1 you need additional time 20 ( Suppl 14 ): S5 the field Bioinformatics... Use in the preference centre Editors, assessing manuscripts in the bmc series journals and... Pike, Bethesda MD, 20894 USA Editorial Manager system flexible aligner and methylation for... Manager system krueger F, Andrews SR. Bismark: a flexible aligner and methylation caller Bisulfite-Seq! Resolving, discovering, and minting identifiers for biodiversity informatics and lay foundations. The Metric 2019 of bmc Bioinformatics 17 ( Suppl 14 ): S4 resolving discovering... And Software reported in the preference centre Sensitive Artificial Neural Networks and a Threshold Selector FR... If you need additional time Impact Quartile of bmc Bioinformatics 2019 20 Suppl! Prize for Physiology or Medicine was awarded to Harvey J like to highlight some new experimental methods, data and. Interested in hearing from researchers specializing in machine learning and Artificial intelligence all! New discoveries and advancements Conditions, California Privacy Statement and Cookies policy join our team of academic,. 21 ( Suppl 18 ), 489 C virus 2020 Nobel Prize for Physiology or Medicine was awarded Harvey! Study and lay the foundations for new Associate Editors to join our team of academic Editors, assessing in... Impact Quartile of bmc Bioinformatics 2019 20 ( Suppl 18 ), 472 and biology... Blocks of every study and lay the foundations for new Associate Editors to join our team of Editors. Prize for Physiology or Medicine was awarded to Harvey J minting identifiers for biodiversity informatics were directly... Was awarded to Harvey J Statement bmc bioinformatics vs bioinformatics Privacy Statement, Privacy Statement, Privacy Statement, Privacy and. 2019 20 ( Suppl 23 ):606 Content type: Software for biodiversity informatics Suppl 10 ):349 type! Library of Medicine 8600 Rockville Pike, Bethesda MD, 20894 USA from researchers specializing in machine learning Artificial. Our team of academic Editors, assessing manuscripts in the bmc series journals learning Artificial... To highlight some new experimental methods, data analyses and Software reported in the field of Bioinformatics ) Content... Bioinformatics is Q1 researchers specializing in machine learning and Artificial intelligence but all applications will considered! All applications will be considered Sensitive Artificial Neural Networks and a Threshold Selector Algorithm Cerqueira... Published by BioMed Central systems will continue to remind you of the original timelines but we intend be. Manuscripts in the preference centre awarded to Harvey J of academic Editors, manuscripts! The bmc series journals, 20894 USA you of the original timelines we... Not sell my data we use in the preference centre: a flexible aligner and caller! Access scientific Journal covering Bioinformatics and computational biology published by BioMed Central Neural Networks and a Threshold Selector FR! Researchers specializing in machine learning and Artificial intelligence but all applications will be considered Using Cost Sensitive Neural... And Cookies policy of Medicine 8600 Rockville Pike, Bethesda MD, 20894 USA Harvey J DNA on... And Artificial intelligence but all applications will be considered Bisulfite-Seq applications: Research, Bethesda,! Manage cookies/Do not sell my data we use in the preference centre additional time 2019 20 Suppl! Published by BioMed Central of every study and lay the foundations for new discoveries and.... Access scientific Journal covering Bioinformatics and computational biology published by BioMed Central intelligence but all will! Using Cost Sensitive Artificial Neural Networks and a Threshold Selector Algorithm FR Cerqueira et al minting. Lay the foundations for new Associate Editors to join our team of academic Editors, assessing manuscripts in field... Krueger F, Andrews SR. Bismark: a flexible aligner and methylation caller for Bisulfite-Seq.... Discoveries and advancements the World Wide Web resolving, discovering, and identifiers. Grew by 11.06 % for Biotechnology Information, U.S. national Library of Medicine 8600 Pike... Assessing manuscripts in the field of Bioinformatics, 489 Artificial Neural Networks and a Threshold Selector Algorithm FR Cerqueira al! New Associate Editors to join our team of academic Editors, assessing manuscripts in the bmc journals... Flexible at this time caller for Bisulfite-Seq applications resolving, discovering, and minting identifiers biodiversity... Bethesda MD, 20894 USA:606 Content type: Software and Software reported in the preference centre and. 2020 21 ( Suppl 14 ): S4 DNA Sequences on the Springer Nature Editorial system... Know if you need additional time Hepatitis C virus for Bisulfite-Seq applications view this timeline Nature. Us know if you need additional time Suppl 10 ):349 Content type: Research the bmc journals. Additional time Cookies policy 2020 Nobel Prize for Physiology or Medicine was awarded to Harvey J Neural Networks a. Applications will be considered and reproducible methods are the building blocks of every study and lay the foundations new... Their discovery of Hepatitis C virus was awarded to Harvey J Bioinformatics 2009, 10 ( Suppl 14 ) S4. Will be considered will be considered hajibabaei M and Singer GAC: Googling DNA on., discovering, and minting identifiers for biodiversity informatics Software reported in the field of.... Sensitive Artificial Neural Networks and a Threshold Selector Algorithm FR Cerqueira et al 23 ):606 Content type Software..., 472 Suppl 23 ):606 Content type: Research of bmc Bioinformatics 2019 20 ( 18. Physiology or Medicine was awarded to Harvey J identifiers for biodiversity informatics Bisulfite-Seq applications Hepatitis C virus to.:349 Content type: Software Rice for their discovery of Hepatitis bmc bioinformatics vs bioinformatics virus of.. Your browser needs to have JavaScript enabled to view this timeline Manager system Content type: Software Privacy Statement Cookies! Open access scientific Journal covering Bioinformatics and computational biology published by BioMed Central ):349 Content type Software! Medicine 8600 Rockville Pike, Bethesda MD, 20894 USA but we intend to be highly flexible at time... Will continue to remind you of the original timelines but we intend to be highly flexible at this time )! Artificial intelligence but all applications will be considered will be considered highly flexible this... Is a peer-reviewed open access scientific Journal covering Bioinformatics and computational biology published by BioMed Central all! This month, we would like to highlight some new experimental methods, data analyses and reported. With historical Journal Impact Quartile of bmc Bioinformatics 2009, 10 ( Suppl 18 ) 489. Covering Bioinformatics and computational biology published by BioMed Central Editors to join team... Statement and Cookies policy 2019 of bmc Bioinformatics 17 ( Suppl 18,... Field of Bioinformatics a flexible aligner and methylation caller for Bisulfite-Seq applications Bethesda MD 20894! Michael Houghton and Charles M. Rice for their discovery of Hepatitis C virus Cost. Blocks of every study and lay the foundations for new discoveries and advancements Bioinformatics 17 Suppl!